Showing posts with label misconduct in research. Show all posts
Showing posts with label misconduct in research. Show all posts

Saturday, May 13, 2023

Springer Closes Wall of Shame

Springer Nature publishing closed the “Wall of Shame” website that recorded the retraction of medical research which failed for lack of procedural integrity. The website was pubished under the banner of Cureus, an open-access, peer-reviewed medical journal.

 

 

This is their statement:

Let’s talk about the Wall of Shame. As a peer-reviewed medical journal, we have a fundamental responsibility to ensure that potentially dangerous medical misinformation is not published. With traditional research integrity methods sometimes falling short, we decided to conduct an experiment by highlighting authors who have committed egregious ethical violations as well as the institutions that enabled them. While we will never abandon this responsibility, we have decided to remove the Wall of Shame tomorrow, May 12th, 2023.

 

Why, you may be asking? Especially when the Cureus community of authors, readers and reviewers were overwhelmingly supportive? We recognize that this is an ongoing problem, but we have determined that there are better ways of addressing academic fraud and dishonesty than by publicly sharing lists of authors. We wish to recenter the focus on correcting the academic record, as that is the ultimate goal of any correction or retraction. We will continue to vigorously investigate allegations of academic fraud and dishonesty, and we will do so objectively, without levying judgment on authors deemed to have acted unethically.

 

PREVIOUSLY ON NECESSARY FACTS

 

Dishonest Scientists: Who is the Guardian? 

20 Percent of Scientists are Crooks 

Science Fair Science Fraud 

Misconduct in Science and Research 

Eyewitness Testimony: Popper, Wittgenstein, and the Innocence Project 


 

Tuesday, January 19, 2021

Katyusha and History as a Science

Beware of historians who quote each other. It was a forgotten lesson that I remembered in pieces while commuting about ten years ago. 

When I was in junior high school, I watched different early morning lectures before going to school. “Sunrise Semester” was the paradigm, but there were others. In the ninth grade, I worked through an entire set on the history of communism. As I remember it now, the sponsors were Harvard University and the Marshall Law School, but the clues have proved impossible to follow. 

 

At the same time, I was on the school newspaper staff and I met a girl there who was a senior. I don’t know why she liked me, but she did talk to me. I told her about the tv lectures and I showed her my notes. She got a hall pass from the teacher and took me to the library. We went to the 900s where the history books were. She pulled down three. “That’s the one,” I said. She opened them all to their bibliographies and pointed to the names of the other authors of the other books. “They just quote each other,” she said. “That’s not history.” Her name was Kathy. Like many in the neighborhood, she was ethnically Russian. I knew her as Kathy; she once said, “My name is Katyusha but I am not an anti-tank rocket.” I had no idea what she meant. A few years later, I was working as a messenger at what we still called City Hospital but which they rebranded as Cuyahoga County Metropolitan General Hospital. Running labs, someone called my name. She was in for something minor, an appendectomy perhaps. We said our hellos and smiled to each other, but her mother was there. The next time that my rounds took me to her ward, she was gone. 

 

But I remembered the lesson and Google having been invented, I looked for “Katyusha.” Of the several versions, I like this one. I had to nod to the old veterans on camera at about 1:50 in. 

 


Varvarahttps://www.youtube.com/watch?v=q4v1nDa7tLY

 

PREVIOUSLY ON NECESSARY FACTS

A Chronology of Recent Historical Periods 

Bringing Philosophy to Athens: Aspasia of Miletos 

The Texas Navy

Newton versus the Counterfeiter 

Murray Rothbard: Fraud or Faker? 


Monday, April 18, 2016

Dishonest Scientists: Who is the Guardian?

The "Routine Activities" theory of crime developed by Marcus Felsen and Lawrence Cohen posited a crime triangle: a willing perpetrator, an available victim, and the lack of a capable guardian. That guardian could just be a neighbor, sitting on their porch, watching the street. In scientific research, it seems to be not clear to some that we all share the roles of capable guardians.

Elsevier's executive publisher, Dr. Jaap van Harten, offered a fallacious analogy when he likened the dishonest researcher to a thief in a shoe store and the reviewer to the shop owner. Dr. van Harten wrote:  
 “No. It is NOT the role of the reviewer to spot ethics issues in papers. It is the responsibility of the author to abide by the publishing ethics rules. Let’s look at it in a different way: If a person steals a pair of shoes from a shop, is this the fault of the shop for not protecting their goods or the shoplifter for stealing them? Of course the fault lies with the shoplifter who carried out the crime in the first place.”
The comment is in a sidebar to this article: “Why unethical research behavior could result in a revoked doctorate: An expert who investigates misconduct cases shares his thoughts and experiences” by Tony Mayer (Posted on 5 April 2016), here. I read it first on the Retraction Watch blog (here). I sent this comment, which was not approved by the moderator:
“The analogy is not parallel. The reviewer is not the shop owner, and neither is the publisher. The publisher is the purchasing department of a retailer. The reviewer is an auditor. If an auditor discovers that the purchasing department is acquiring goods that lack clear title, that fact must be reported. It must be reported, first, internally, but, also, quite likely, to law enforcement authorities with competent jurisdiction. Those people are analogous to the ethics committee or integrity office of the institution for which the authors work.
 Rather than a dodge, we deserve a higher standard of ethics from one of the world's leading publishers of scientific research. Instead of limiting the roles of publishers (and their reviewers), it would be more productive for a renowned expert like Dr. van Harten to suggest the standards and means for strengthening and extending them.”
ALSO ON NECESSARY FACTS

Friday, January 11, 2013

Four Books About Bad Science

When Science Goes Wrong: Twelve Tales from the Dark Side of Discovery by Simon LeVay (Plume Penguin, 2008).  LeVay lays out his facts in careful narratives.  In many cases, he interviewed the key actors, albeit some years after the events.  He marshals the pros and cons before stating his final conclusion.  The cases come from a several sciences, including volcanology, criminology, meteorology, microbiology, genetics, and nuclear physics. 

In 1993, geologists attended a conference in Columbia where the Galeras volcano had become active. They visited the calderon, climbing down into the crater. When it erupted, most of them were killed.  Among the survivors was the only scientist actually wearing the protective gear mandated by the National Science Foundation.  Some of the victims were in jeans and sneakers. 

The case from criminal forensics about Josiah Sutton of Houston, Texas, took DNA evidence past the confines of even the Innocence Project.  In this case, the so-called gold standard of physical criminalistics proved to be fool’s gold.  The police lab had committed a series of mistakes, some perhaps accidental and careless, others apparently purposefully fraudulent.  The victim wrongly identified two men as her attackers.  When the DNA samples matched neither man, the prosecutor insisted on their guilt, and posited the existence of a third unidentified attacker.  This is a common ploy with prosecutors who refuse to admit their mistake. 

Embargoed Science by Vincent Kierman (University of Illinois Press, 2006).  Major academic journals such as Nature, Science, the New England Journal of Medicine, and a hundred or so others, have a policy of announcing important publications by sending press releases to major mainstream media on the condition that the reporters not publish until the journal does.  The result is loud bursts of astounding science stories breaking on our awareness ... which then fade … until the next time.  The true costs include the loss of reflection and review, as contradictory findings roll out over the years without in-depth comparison and contrast.  Another cost is the loss of independence both of the news media which will not pursue a story beyond the press release; and also among the scientists who are constrained to divulge only what they publish in peer-reviewed journals. 

Yes, We Have No Neutrons: An Eye-Opening Tour Through the Twists and Turns of Bad Science by A. K. Dewdney (John Wiley & Sons, 1997).  Dewdney took over from Martin Gardner in Scientific American, and this book is a modernization of Gardner’s Fads and Fallacies in the Name of Science.  The stories here about N-rays, intelligence quotients, Freudian psychotherapy, cold fusion, Biosphere 2, and SETI (the Search for Extraterrestrial Intelligence) are exemplar warnings to avoid the known dangers of confirmation bias, arrogance, and ambition. 

Dewdney offers the model of the sorcerer and the apprentice for his narrative analogy.  It is the familiar story from Goethe as delivered by Disney.  We all make mistakes, even sorcerers.  It is when the apprentice presumes beyond his true abilities that disasters unfold.  In these stories, disasters come from scientists who should be sorcerers acting like mere apprentices, forgetful of the full canon of the scientific method, from the creation of testable hypotheses to publication and peer review. 
Yes, We Have No Neutrons does not address fraudulent science, but mistaken science. The appropriate persona, therefore is not the con artist, but the bumbler: the apprentice if you will.” (Page 2) “What is bad science? To begin with, whatever it means, bad science must be distinguished from fraudulent science.  Apprentices, by definition, honestly believe that they are sorcerers. Fraudulent scientists (and would-be scientists) know that they are cheating when they fudge experiments, steal ideas, or make false claims. They are more like evil magicians than apprentices. …  Bad science happens when someone strays in a fatal way from the scientific method.” (Page 17).
Dewdney takes the reader through three doors to explore the castle of science.  First, he differentiates technology from science.  “Technology consists of objects that have specific purpose. Science consists of methods and results.”  This is important because in the mass media the equipment of science – antennae, computers, reactors, satellites, etc. – stand for science.  Dewdney points out, however, that these are not essentially different from other examples of our material culture such as bicycles, dental floss, lawn mowers, refrigerators, and telephones. 

Indeed, I add here that in the book Biopunk: DIY Scientists Hack the Software of Life by Marcus Wohlsen (reviewed on Necessary Facts here), the author points out for 100 years, scientists from Pasteur to Salk worked without apparatus that we have in our kitchens. The same applies to our garage and basement workshops.  The point is that the mass media presentations of the gizmos and gadgets confuse technology with science, which Dewdney carefully delineates.  Science is a method.

However, Dewdney falls into the analytic-synthetic dichotomy. His second door delineates deductive from inductive science.  He does not unify the two, though, indeed, they must both identify the same reality.  Behind the third door is the getting and testing of ideas.  Scientists observe, ask questions, formulate hypothesis and perform experiments.  The goal of the experiment is to challenge and pass the theory.  This is where most of the fallen sorcerers reveal themselves to be mere apprentices.  Sigmund Freud built his wonderful theories from six case studies and no statistical samples or blind tests. 

Junk Science: How Politicians, Corporations, and Other Hucksters Betray Us by Dan Agin, Ph.D., (Thomas Dunne St. Martin’s Press, 2006) repeats many of the known stories of Piltdown Man, eugenics, phrenology, and Lysenko.  As a working biologist, he also offers cases that are less well known to the general public, such as Emil Abderhalden’s “defense enzymes.”  Agin also writes about the recent cases (1997-2004) of Marion Brach, Friedhelm Herrmann, and Roland Mertelsmann who conspired to publish at least 37 and perhaps 100 papers for which the experiments and data were entirely fabricated.

“There are two prevalent myths concerning scientific fraud.
The first myth states that most scientific experiments are replicated by other laboratories, that science is self-correcting because the discovery of fraud involving the fabrication of data is inevitable.
 The second myth is that scientific papers involving fabrication of data are extremely rare, with only a few fraudulent papers published in any one year." (Page 39)
In fact, given the huge body of published papers, even a small percentage of fraudulent cases – perhaps only 0.04% according to the arithmetic of published cases from the Office of Research Integrity of the U.S. Department of Health and Human Services – means that from the 5,600 significant scientific journals come 400 fraudulent papers each year.  However, by the metrics of criminologist Liqun Cao, (see previous posts on this blog) the number might be closer to 200,000 given that the intentional harms might be small: rounding up or rounding down, dropping inconvenient data, etc.  The median guess might be the most accurate. “In one survey published by American Scientist in 1993, between 6 and 9 percent of scientist respondents said that they were personally aware of results that had been plagiarized or fabricated within their facilities.” (Page 40)

The downside is that Dr. Agin has his own political views which color his diagnosis and remedies.  Corporations can be evil in selling us what we demand – such as junk foods and the fad diets to counter their effects, to say nothing of cigarettes – but the government is only unresponsive when politicians give in to the “wrong” pressure groups, such as Christians who were opposed to embryonic stem cell research.  Agin accepts all of the claims of anthropogenic global warming. He agrees with its fundamental reality. He falls in with the inevitable consequence that governments must do something immediately, no matter how severe. 

Dan Agin’s politics aside, the book is nonetheless an outstanding expose of many instances of bad science, much of it going on right now.

Friday, January 4, 2013

Criminality and Scientific Research:Why Scientists Go Wrong; and Why the Wrong People Become Scientists

“Crime knows no neighborhood” is an axiom of criminology. In other words, every population contains members who stray from folkways, violate norms, harm others, break laws, ignore contracts, and betray trusts.  Occupation, avocation, ethnicity, nationality, language group, religion, philosophy, ideology, age, sex, gender, height, weight, body mass, and shoe size are all irrelevant. 

So, of course, some scientists are criminals.  They falsify data; and they embezzle research funds. They also harass coworkers and subordinates, discriminate on the basis of race, age, religion, and gender. And they cheat on their spouses, beat their dogs, and kick their cats.  But not every scientist who falsifies data abuses their aged parents. In fact, very few do.  The arithmetic of intersecting sets limits the count.  If 20% of scientists publish phony findings and if 20% of researchers carry non-existent students on their payrolls, then only 4% of research scientists do both.

At the same time, criminality is a way of life.  The criminal researcher does not round up the value of a single point on one graph to make the curve smoother.  And the vagary is not the first lapse after 35 years of devotion to truth.  If a complete and nearly omniscient investigation could be conducted, it would most likely show falsified lab reports in ninth grade biology. 

Of course, “most likely” is not “certainly.” When the case of Jan Hendrick Schön was finally resolved, the University of Konstanz revoked his doctorate, even though his dissertation was above reproach. 

Revocation of degree is perhaps the most serious punishment any scientist can face. 
See “Another Case of Fraud in University Research” here.  Even though Dr. Eric Poehlman was sentenced to a year and a day in prison. he kept his degrees.

It seems that in the instance of Jan Hendrick Schön the pressure for results was his motive for crime.  The pressure for results has been cited as a cause of research fraud.  However, it is also true that truck drivers also labor under a call for results and that does not justify crime for them.  Basically, everyone whether in a market economy or a centralized state is called upon to produce.  At the end of a sabbatical, a professor is expected to show more than a sun tan.

Given all of the above, the research enterprise that does not engage independent investigation jeopardizes its funding and its social status.  Which loss would be the worse is hard to say.

Whether all crimes are evenly distributed across all neighborhoods is another question.  It remains an easy assumption that life sciences are more susceptible to deviance than physical sciences.  Tons of public money are thrown at both; but as living entities are more complicated than subatomic particles, experimental results may be harder to quantify rigorously.  Confirmation bias may be a greater danger when we want to believe that we are helping other people live longer and better.  Another explanation is that the US Department of Health and Human Services actually has  an active Office of Research Integrity, while the U.S. Department of Energy has none. 

On 6 April [2011], a federal district judge in Boston, Massachusetts, dismissed a lawsuit that I had filed in 2009 under the US Freedom of Information Act. He concluded that the US government does not have to release a report on an investigation into a case of alleged scientific misconduct at a national laboratory. The ruling was disappointing but liberating: I finally had occasion to write about a case that has shown how the US Department of Energy (DOE) takes a strikingly hands-off approach to the oversight of such investigations.
"Misconduct oversight at the DOE: Investigation closed" by Eugenie Samuel Reich
Nature 475, 20-22 (2011)
Published online 6 July 2011 here
University oversight committees focus on human factors. We seek to protect individuals from unintended harm during experiments and surveys in psychology and sociology. But you cannot hurt a chemical or a star.  Short of serendipity, we only find what we seek. 

Previously on Necessary Facts